Eukaryotes Genomes - SACCHAROMYCES CEREVISIAE
Saccharomyces cerevisiae
is commonly known as baker's yeast and was the first eukaryote to have its genome fully sequenced
Saccharomyces
cerevisiae is commonly known as "bakers yeast", "brewers yeast"or
"budding yeast".
Yeast are
a group of unicellular fungi a few species of which are commonly
used to leaven bread and ferment alcoholic beverages. More than
one-thousand species of yeasts have been described. The most commonly
used yeast is Saccharomyces cerevisiae, which was domesticated
for wine, bread and beer production thousands of years ago. Most
yeasts belong to the division Ascomycota.
Yeast physiology
can be either obligately aerobic or facultatively fermentative.
There is no known obligately anaerobic yeast. In the absence of
oxygen, fermentative yeasts produce their energy by converting sugars
into carbon dioxide and ethanol (alcohol). In brewing, the ethanol
is used, while in baking the carbon dioxide raises the bread and
the ethanol evaporates.
The fermentation
of beer and wine was originally caused by naturally occurring yeasts
present in the environment. Some wineries still use natural yeast
strains, however most modern brewers use highly cultured isolates,
e.g. Saccharomyces carlsbergensis, named after the Carlsberg
Brewery in Copenhagen. The bubbles in sparkling wines such as Champagne
are trapped CO 2 , the result of yeast fermenting sugars in the
grape juice. One yeast cell can ferment approximately its own weight
of glucose per hour, giving rise to large volumes of CO 2.
Yeasts
can reproduce asexually through budding or sexually through the
formation of ascospores . During asexual reproduction a new bud
grows out of the parent yeast when the condition is right, then
after the bud reaches an adult size, it separates from the parent
yeast. Under low nutrient conditions, yeasts that are capapable
of sexual reproduction will form ascospores.
Saccharomyces
cerevisiae are single-celled fungi which multiply by budding,
or in some cases by division (fission). Yeast fermentations comprise
the oldest and largest application of microbial technology. Beer
brewers classify yeasts as top-fermenting and bottom-fermenting.
This distinction was introduced by the Dane Emil Christian Hansen.
Saccharomyces cerevisiae is a top-fermenting yeast (so-called
because they float to the top of the beer) it produces higher alcohol
concentrations and prefers higher temperatures, top-fermenting yeasts
produce fruitier, sweeter, real ale type beers.
In pharmacy and chemistry,
a large number of substances (vitamins and enzymes) are extracted
from this organism. In addition, thanks to genetic engineering,
some medications are now produced by manipulated yeasts, for example
vaccines against hepatitis B surface antigen are produced by Saccharomyces
cerevisiae utilising recombinant technology.
Aside
from its industrial value, Saccharomyces cervisiae is a very
useful model for scientists: it is a eukaryotic organism (its genetic
material is contained in a nucleus), and is therefore similar to
cells from evolved organisms. As easy to manipulate as a bacterium,
yeast is a simplified model of the cells that make up human beings.
It has been widely studied because the cell cycle in a simple yeast
is very similar to the cell cycle in humans, and regulated by homologous
proteins. Its prominent useful features are the cheap and easy cultivation,
short generation times, the detailed genetic and biochemical knowledge
accumulated in many years of research and the ease of the application
of molecular techniques for its genetic manipulation. Therefore,
this fungus provides a highly suitable system to study basic biological
processes that are relevant for many other higher eukaryotes including
man.
Saccharomyces
cerevisiae was the first eukaryote to have its genome sequenced
(published in 1996 ). The genome is composed of about 13 million
bp and contains 6,275 genes . It is estimated that yeast shares
about 23% of its genome with humans.
Hierarchy Description:
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome I
- Genome accession number: U00091
- Medline references:
Journal citation |
Pubmed ID |
Proc. Natl. Acad. Sci. U.S.A. 92:3809-3813 (1995) |
|
Science 274 (5287), 546 (1996) |
8849441 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome II
- Genome accession number: Y13134
- Medline references:
Journal citation |
Pubmed ID |
EMBO J. 13:5795-5809 (1994) |
7813418 |
Science 274 (5287) 546 (1996) |
8849441 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome V
- Genome accession number: U00092
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome VII
- Genome accession number: Y13135
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome VIII
- Genome accession number: U00093
- Medline references:
Journal citation |
Pubmed ID |
Science 265:2077-2082(1994) |
8091229 |
Science 274 (5287), 546 (1996) |
8849441 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome IX
- Genome accession number: Z47047
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome X
- Genome accession number: Y13136
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
EMBO J. 15:2031-2049(1996) |
8641269 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XI
- Genome accession number: Y13137
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 369:371-378(1994) |
8196765 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XII
- Genome accession number: Y13138
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XIII
- Genome accession number: Z71257
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XIV
- Genome accession number: Y13139
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XV
- Genome accession number: Y13140
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
- Genus: Saccharomyces
- Species: cerevisiae
- Strain: S288C
- Chromosome XVI
- Genome accession number: U00094
- Medline references:
Journal citation |
Pubmed ID |
Science 274 (5287), 546 (1996) |
8849441 |
Nature 387 (6632 Suppl):78-81(1997) |
9169868 |
- Taxonomy:
4932
References:
http://www.mips.biochem.mpg.de/proj/yeast/info/sequence.html
http://www-micro.msb.le.ac.uk/video/Scerevisiae.html
http://www.yeastgenome.org/
http://en.wikipedia.org/wiki/Yeast
http://www.pasteur.fr/
|